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Intron Name: Anas_platyrhynchos_platyrhynchos_3_299483_299939_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

299483 - 299939

Intron Length:

457

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

ACTTCTTATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTGGTGTTAATT

Flanking Amino Acid:

LANNEIHVAIAAEDIGEDEN

Intron Amino Acid Position:

1024

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

85.6

30.4

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

75.6

0.58

0.9

74.3

34.8

Minor 5ss

44.2

-0.6

2.9

66.4

38.5

Minor BPS

53.6

0.19

2.1

74.52

43.3

Associated Gene:

Gene:

JAG1

Ensembl Gene ID:

ENSAPLG00000009296

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009806

298130 - 331665

33536