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Intron Name: Anas_platyrhynchos_platyrhynchos_3_29965804_29966128_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29965804 - 29966128

Intron Length:

325

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTTAGTATT

5'SS Class:

major

3'SS Sequence:

CAACTCTTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

CATCCATTAATA

Flanking Amino Acid:

PGDAIISLDFGTQKFEEAPA

Intron Amino Acid Position:

414

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

1.1

84.7

32.3

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

74.9

0.56

0.9

65.4

40.5

Minor 5ss

38.2

-1.3

2.8

50.3

39.9

Minor BPS

60.4

0.32

1.6

67.46

38.7

Associated Gene:

Gene:

EPAS1

Ensembl Gene ID:

ENSAPLG00000007160

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027933

29890219 - 29973325

83107

ENSAPLT00000007487

29894709 - 29973325

78617

ENSAPLT00000039651

29933564 - 29973325

39762