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Intron Name: Anas_platyrhynchos_platyrhynchos_3_29970416_29970943_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

29970416 - 29970943

Intron Length:

528

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

CTATGTAAATTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

CTTAATTTAACT

Flanking Amino Acid:

KKSLSTSVLTDEFVCNSRGL

Intron Amino Acid Position:

756

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

73.1

31.1

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

57.9

0.18

57.1

42.2

Minor 5ss

29.9

-2.3

3.3

42.5

Minor BPS

67.1

0.61

1.6

81.56

Associated Gene:

Gene:

EPAS1

Ensembl Gene ID:

ENSAPLG00000007160

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039651

29933564 - 29973325

39762

ENSAPLT00000027933

29890219 - 29973325

83107

ENSAPLT00000007487

29894709 - 29973325

78617