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Intron Name: Anas_platyrhynchos_platyrhynchos_3_3001437_3006372_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3001437 - 3006372

Intron Length:

4936

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGATAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATTAT

U12 Branch Point Sequence:

TTTTTCTTACAG

Flanking Amino Acid:

LKTYVPDGFGDIVDALSDPK

Intron Amino Acid Position:

830

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.8

79.1

24.3

Major BPS

69.6

0.49

1.2

60.1

46.3

Major PPT

96.2

1.04

0.5

91.9

19.1

Minor 5ss

31.8

-2.1

37.8

Minor BPS

63.2

0.28

1.8

72.05

40.8

Associated Gene:

Gene:

PLCB4

Ensembl Gene ID:

ENSAPLG00000013577

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014232

2968731 - 3058313

89583