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Intron Name: Anas_platyrhynchos_platyrhynchos_3_30014448_30016004_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30014448 - 30016004

Intron Length:

1557

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTAGG

5'SS Class:

major

3'SS Sequence:

CCTTTTTCCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTATAT

U12 Branch Point Sequence:

TAATGTATATCT

Flanking Amino Acid:

QIHQQAVKRSFSQGLQDLLR

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.1

66.8

44.5

Major BPS

64.1

0.35

1.2

45.5

Major PPT

83.9

0.76

0.7

79.2

26.4

Minor 5ss

37.3

-1.4

2.7

48.1

41.6

Minor BPS

45.4

-0.2

2.2

66.86

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001954

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039809

30014238 - 30017195

2958

ENSAPLT00000001947

30014238 - 30040116

25879