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Intron Name: Anas_platyrhynchos_platyrhynchos_3_30080166_30080942_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30080166 - 30080942

Intron Length:

777

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATATCTG

5'SS Class:

major

3'SS Sequence:

TCTTTCTTGCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAGAA

U12 Branch Point Sequence:

ATGACTTCAATC

Flanking Amino Acid:

NVPFLLVGTQIDLRDDPKTL

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

67.7

43.2

Major BPS

0.5

39.8

Major PPT

77.6

0.62

0.9

73.3

37.2

Minor 5ss

43.3

-0.7

2.9

58.1

46.5

Minor BPS

54.1

0.11

1.5

61.6

38.1

Associated Gene:

Gene:

RHOQ

Ensembl Gene ID:

ENSAPLG00000029905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045285

30065327 - 30082113

16787