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Intron Name: Anas_platyrhynchos_platyrhynchos_3_30082512_30094488_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30082512 - 30094488

Intron Length:

11977

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTATC

5'SS Class:

strong_major

3'SS Sequence:

ATTCTCCCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

CTGTTTTTACCT

Flanking Amino Acid:

IPLDWDRPWQVWPISCSLGA

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

86.4

29.1

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

77.5

0.62

0.8

74.5

Minor 5ss

36.7

-1.5

2.7

46.1

42.1

Minor BPS

60.4

0.41

1.6

74.34

43.4

Associated Gene:

Gene:

PIGF

Ensembl Gene ID:

ENSAPLG00000007535

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029134

30080562 - 30102638

22077

ENSAPLT00000007819

30078327 - 30102638

24312