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Intron Name: Anas_platyrhynchos_platyrhynchos_3_300939_301180_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

300939 - 301180

Intron Length:

242

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTTCAG

5'SS Class:

major

3'SS Sequence:

AATATGTCTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTCTCAAGC

Flanking Amino Acid:

PGRSGPGCQEVTGRPCITTV

Intron Amino Acid Position:

864

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.6

1.1

63.4

42.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

71.7

0.49

66.8

Minor 5ss

39.7

-1.2

2.8

49.6

46.6

Minor BPS

64.3

0.43

1.8

78.1

37.8

Associated Gene:

Gene:

JAG1

Ensembl Gene ID:

ENSAPLG00000009296

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009806

298130 - 331665

33536