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Intron Name: Anas_platyrhynchos_platyrhynchos_3_30094598_30099779_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30094598 - 30099779

Intron Length:

5182

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

ACTTCTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

AGTCTTGTAACA

Flanking Amino Acid:

QAWIRVFSKNGATSIWENSL

Intron Amino Acid Position:

146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

75.8

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

83.3

0.75

0.8

77.3

30.6

Minor 5ss

-1

2.7

45.9

42.3

Minor BPS

49.4

-0

63.32

36.9

Associated Gene:

Gene:

PIGF

Ensembl Gene ID:

ENSAPLG00000007535

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029134

30080562 - 30102638

22077

ENSAPLT00000007819

30078327 - 30102638

24312