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Intron Name: Anas_platyrhynchos_platyrhynchos_3_3016314_3016539_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

3016314 - 3016539

Intron Length:

226

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

ATGAATTATACAG|T

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TGTTATTTAATT

Flanking Amino Acid:

YLKTHAIEFVNYNKRQMSRI

Intron Amino Acid Position:

613

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.5

0.25

1.2

65.1

41.6

Major BPS

90.7

1.01

0.7

19.9

Major PPT

0.36

1.1

58.4

45.7

Minor 5ss

95.8

1.54

0.7

90.3

20.6

Minor BPS

72.9

0.8

1.4

85.65

34.4

Associated Gene:

Gene:

PLCB4

Ensembl Gene ID:

ENSAPLG00000013577

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014232

2968731 - 3058313

89583