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Intron Name: Anas_platyrhynchos_platyrhynchos_3_3017380_3021812_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3017380 - 3021812

Intron Length:

4433

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGATTG

5'SS Class:

major

3'SS Sequence:

AATGTGTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCTTTTTAATG

Flanking Amino Acid:

KESVAISVKKGLVTVEDEQA

Intron Amino Acid Position:

538

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

68.5

39.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

74.6

0.55

Minor 5ss

34.7

-1.7

3.4

46.1

49.1

Minor BPS

71.1

0.52

1.3

69.97

38.4

Associated Gene:

Gene:

PLCB4

Ensembl Gene ID:

ENSAPLG00000013577

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014232

2968731 - 3058313

89583