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Intron Name: Anas_platyrhynchos_platyrhynchos_3_3027623_3028267_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3027623 - 3028267

Intron Length:

645

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGCC

5'SS Class:

strong_major

3'SS Sequence:

TTGCATTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TAATTTTGAATC

Flanking Amino Acid:

KAMCTDILFKDVIQAIKETA

Intron Amino Acid Position:

387

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

34.8

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

70.6

0.46

1.1

70.7

38.8

Minor 5ss

33.3

-1.9

3.2

44.6

43.4

Minor BPS

0.26

1.3

64.79

34.5

Associated Gene:

Gene:

PLCB4

Ensembl Gene ID:

ENSAPLG00000013577

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014232

2968731 - 3058313

89583