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Intron Name: Anas_platyrhynchos_platyrhynchos_3_30295908_30297216_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30295908 - 30297216

Intron Length:

1309

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTAAAC

U12 Branch Point Sequence:

TTTTCTTTTTTT

Flanking Amino Acid:

ATAISHVHKEEGGEHTQAMK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

76.2

39.9

Major BPS

46.9

-0.1

1.2

52.9

39.1

Major PPT

94.8

1.01

0.5

92.6

17.3

Minor 5ss

-1.9

3.5

49.2

47.1

Minor BPS

46.2

-0.2

3.6

83.31

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023817

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034589

30295182 - 30298087

2906