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Intron Name: Anas_platyrhynchos_platyrhynchos_3_30325450_30328753_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30325450 - 30328753

Intron Length:

3304

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

CACTGATCTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

GTTCACTGATCT

Flanking Amino Acid:

ETKATQTFKMTAAKQLAQVL

Intron Amino Acid Position:

334

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

65.8

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

64.9

0.34

0.9

40.1

Minor 5ss

28.7

-2.4

3.5

34.8

43.6

Minor BPS

49.3

0.03

1.9

72.91

42.9

Associated Gene:

Gene:

TTC7A

Ensembl Gene ID:

ENSAPLG00000007643

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007960

30298108 - 30465684

167577

ENSAPLT00000007950

30298108 - 30465684

167577