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Intron Name: Anas_platyrhynchos_platyrhynchos_3_30328915_30329354_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30328915 - 30329354

Intron Length:

440

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGCGTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAC

U12 Branch Point Sequence:

TTCCTCAGAAAA

Flanking Amino Acid:

CRKPELYTEENVYCPRDNVE

Intron Amino Acid Position:

387

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

35.3

Major BPS

73.9

0.59

65.3

41.6

Major PPT

86.9

0.83

0.7

84.6

30.4

Minor 5ss

-0.7

3.5

64.7

Minor BPS

46.3

-0.2

1.8

59.93

39.2

Associated Gene:

Gene:

TTC7A

Ensembl Gene ID:

ENSAPLG00000007643

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007960

30298108 - 30465684

167577

ENSAPLT00000007950

30298108 - 30465684

167577