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Intron Name: Anas_platyrhynchos_platyrhynchos_3_30329419_30339721_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30329419 - 30339721

Intron Length:

10303

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCCAA

5'SS Class:

strong_major

3'SS Sequence:

TGTCTGTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTGAT

U12 Branch Point Sequence:

CTCTGCTGAGGT

Flanking Amino Acid:

LLLLLISESMANRDAVISRA

Intron Amino Acid Position:

409

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

66.8

40.3

Major BPS

73.6

0.59

1.2

65.3

43.7

Major PPT

74.2

0.54

0.9

65.4

41.1

Minor 5ss

37.3

-1.4

3.1

44.3

44.6

Minor BPS

42.2

-0.5

2.3

60.09

49.1

Associated Gene:

Gene:

TTC7A

Ensembl Gene ID:

ENSAPLG00000007643

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007960

30298108 - 30465684

167577

ENSAPLT00000007950

30298108 - 30465684

167577