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Intron Name: Anas_platyrhynchos_platyrhynchos_3_303390_304006_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

303390 - 304006

Intron Length:

617

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTAATATATCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAATAT

U12 Branch Point Sequence:

CTCTCCTTAATA

Flanking Amino Acid:

DGWEGTYCETNINDCSKNPC

Intron Amino Acid Position:

673

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

23.8

Major BPS

67.5

0.44

1.1

63.7

42.3

Major PPT

67.9

0.4

60.1

Minor 5ss

41.2

-1

2.8

49.4

41.3

Minor BPS

79.5

0.92

1.2

78.78

38.5

Associated Gene:

Gene:

JAG1

Ensembl Gene ID:

ENSAPLG00000009296

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009806

298130 - 331665

33536