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Intron Name: Anas_platyrhynchos_platyrhynchos_3_30351627_30362726_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30351627 - 30362726

Intron Length:

11100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGCAAG

5'SS Class:

strong_major

3'SS Sequence:

TCATCTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

TAATTCTCAACC

Flanking Amino Acid:

AKVCIGSLHWLEEGENFAKM

Intron Amino Acid Position:

518

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

68.8

43.8

Major BPS

0.72

78.4

31.2

Major PPT

85.1

0.79

0.8

80.3

31.4

Minor 5ss

38.3

-1.3

2.8

40.5

45.5

Minor BPS

66.7

0.5

1.5

72.8

37.6

Associated Gene:

Gene:

TTC7A

Ensembl Gene ID:

ENSAPLG00000007643

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007960

30298108 - 30465684

167577