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Intron Name: Anas_platyrhynchos_platyrhynchos_3_30416041_30421303_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30416041 - 30421303

Intron Length:

5263

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGGAAA

5'SS Class:

major

3'SS Sequence:

GTTTGGTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAA

U12 Branch Point Sequence:

TCTTCTTTGTTT

Flanking Amino Acid:

TLPDAHDTDSGSQRASSLAA

Intron Amino Acid Position:

691

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

0.9

72.7

33.2

Major BPS

65.3

0.38

71.6

30.1

Major PPT

71.5

0.49

61.8

44.4

Minor 5ss

26.3

-2.7

2.9

27.3

37.8

Minor BPS

46.9

-0.1

3.4

78.01

39.5

Associated Gene:

Gene:

TTC7A

Ensembl Gene ID:

ENSAPLG00000007643

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007960

30298108 - 30465684

167577

ENSAPLT00000007950

30298108 - 30465684

167577