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Intron Name: Anas_platyrhynchos_platyrhynchos_3_30421439_30432577_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30421439 - 30432577

Intron Length:

11139

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTAAT

U12 Branch Point Sequence:

TTCAGCTAATGG

Flanking Amino Acid:

TALEQIWLQAAELFMEQHHL

Intron Amino Acid Position:

736

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

77.1

37.8

Major BPS

70.5

0.51

1.1

69.7

35.5

Major PPT

96.3

1.04

0.5

95.7

14.9

Minor 5ss

-1.5

48.7

41.1

Minor BPS

-1.1

2.3

43.05

48.2

Associated Gene:

Gene:

TTC7A

Ensembl Gene ID:

ENSAPLG00000007643

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007960

30298108 - 30465684

167577

ENSAPLT00000007950

30298108 - 30465684

167577