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Intron Name: Anas_platyrhynchos_platyrhynchos_3_304805_305251_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

304805 - 305251

Intron Length:

447

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTGTT

5'SS Class:

major

3'SS Sequence:

GTTTTTTCTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAGAAT

U12 Branch Point Sequence:

GTTTTTTCTACA

Flanking Amino Acid:

KDHCRTTPCEVIDSCTVAVA

Intron Amino Acid Position:

580

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

1.1

79.1

34.5

Major BPS

54.1

0.1

1.4

64.1

39.8

Major PPT

89.4

0.89

0.7

84.3

30.8

Minor 5ss

41.1

-1

3.1

58.6

Minor BPS

51.2

0.03

1.8

67.63

38.5

Associated Gene:

Gene:

JAG1

Ensembl Gene ID:

ENSAPLG00000009296

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009806

298130 - 331665

33536