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Intron Name: Anas_platyrhynchos_platyrhynchos_3_30507947_30509177_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30507947 - 30509177

Intron Length:

1231

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATGAA

U12 Branch Point Sequence:

TTTCTCTGAATA

Flanking Amino Acid:

IDGDGQVNYEEFVQMMTGTV

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

75.5

0.63

40.9

Major PPT

92.1

0.95

0.6

87.3

23.1

Minor 5ss

32.6

-2

3.1

44.2

Minor BPS

68.2

0.57

1.4

77.51

32.7

Associated Gene:

Gene:

CALM2

Ensembl Gene ID:

ENSAPLG00000030583

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024957

30466969 - 30519619

52651