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Intron Name: Anas_platyrhynchos_platyrhynchos_3_30509314_30510146_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30509314 - 30510146

Intron Length:

833

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTAGAT

5'SS Class:

major

3'SS Sequence:

TTTTCCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTGTAT

U12 Branch Point Sequence:

TAGACTTGTATC

Flanking Amino Acid:

IREAFRVFDKDGNGYISAAE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.1

68.1

Major BPS

59.2

0.23

1.4

61.1

45.5

Major PPT

0.97

0.6

88.6

20.7

Minor 5ss

31.1

-2.2

3.6

47.2

48.1

Minor BPS

45.3

-0.3

1.7

52.8

Associated Gene:

Gene:

CALM2

Ensembl Gene ID:

ENSAPLG00000030583

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024957

30466969 - 30519619

52651