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Intron Name: Anas_platyrhynchos_platyrhynchos_3_30510254_30510330_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30510254 - 30510330

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

AATTATCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

GTTTTTCTAACA

Flanking Amino Acid:

QDMINEVDADGNGTIDFPEF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

83.3

29.1

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

77.8

0.63

0.9

70.6

39.9

Minor 5ss

-0.6

3.2

62.3

43.4

Minor BPS

64.8

0.46

1.6

76.34

34.4

Associated Gene:

Gene:

CALM2

Ensembl Gene ID:

ENSAPLG00000030583

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024957

30466969 - 30519619

52651