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Intron Name: Anas_platyrhynchos_platyrhynchos_3_30588843_30590406_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30588843 - 30590406

Intron Length:

1564

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAATT

5'SS Class:

strong_major

3'SS Sequence:

CTGGTGTTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTATAAT

U12 Branch Point Sequence:

AGCTGTATAATC

Flanking Amino Acid:

DLDLICRAHQVVEDGYEFFA

Intron Amino Acid Position:

249

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

86.3

Major BPS

70.1

0.5

1.3

72.3

40.4

Major PPT

65.4

0.35

1.1

60.2

44.9

Minor 5ss

45.5

-0.5

2.9

66.2

44.9

Minor BPS

45.7

-0.3

1.9

53.85

38.5

Associated Gene:

Gene:

PPP1CB

Ensembl Gene ID:

ENSAPLG00000008367

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008727

30587287 - 30614883

27597