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Intron Name: Anas_platyrhynchos_platyrhynchos_3_30602892_30614831_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30602892 - 30614831

Intron Length:

11940

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGCC

5'SS Class:

strong_major

3'SS Sequence:

CATCTCATTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

ACTGTCTTAATT

Flanking Amino Acid:

VDSLITRLLEVRGCRPGKIV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.3

35.8

Major BPS

0.92

0.9

86.2

29.1

Major PPT

77.9

0.63

0.9

74.1

34.9

Minor 5ss

32.2

-2

3.3

41.8

45.1

Minor BPS

68.8

0.67

1.4

77.24

40.1

Associated Gene:

Gene:

PPP1CB

Ensembl Gene ID:

ENSAPLG00000008367

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008727

30587287 - 30614883

27597