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Intron Name: Anas_platyrhynchos_platyrhynchos_3_30796912_30815926_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30796912 - 30815926

Intron Length:

19015

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTCACTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAACCAT

U12 Branch Point Sequence:

TTTTTCTCACTA

Flanking Amino Acid:

WDGNEMAKRAKAYFKTFVPQ

Intron Amino Acid Position:

377

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

33.6

Major BPS

57.8

0.19

1.3

67.1

39.2

Major PPT

80.1

0.68

0.8

75.5

34.3

Minor 5ss

35.2

-1.7

2.9

41.4

39.1

Minor BPS

59.3

0.29

1.8

74.85

37.3

Associated Gene:

Gene:

BABAM2

Ensembl Gene ID:

ENSAPLG00000004664

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004846

30796848 - 30956202

159355