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Intron Name: Anas_platyrhynchos_platyrhynchos_3_30875334_30912757_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30875334 - 30912757

Intron Length:

37424

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGAATG

5'SS Class:

strong_major

3'SS Sequence:

TTTTAATGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTATTTTTAATG

Flanking Amino Acid:

EIYAGKKNNWDVNEDPGEDV

Intron Amino Acid Position:

205

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

75.5

40.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

78.9

0.65

73.3

40.8

Minor 5ss

36.6

-1.5

41.4

44.7

Minor BPS

72.1

0.56

1.2

71.31

36.2

Associated Gene:

Gene:

BABAM2

Ensembl Gene ID:

ENSAPLG00000004664

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004846

30796848 - 30956202

159355