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Intron Name: Anas_platyrhynchos_platyrhynchos_3_30912953_30927967_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30912953 - 30927967

Intron Length:

15015

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TATAATTCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TCTTTTATAATT

Flanking Amino Acid:

EFLPDPSALHNLASWNPSNP

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

86.5

28.5

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

68.8

0.42

42.4

Minor 5ss

40.8

-1

2.8

57.5

39.6

Minor BPS

63.8

0.51

1.6

79.74

Associated Gene:

Gene:

BABAM2

Ensembl Gene ID:

ENSAPLG00000004664

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004846

30796848 - 30956202

159355