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Intron Name: Anas_platyrhynchos_platyrhynchos_3_30958859_30976034_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

30958859 - 30976034

Intron Length:

17176

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTACC

5'SS Class:

strong_major

3'SS Sequence:

TAAATTGGAACAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

ATTGCTTTAAAT

Flanking Amino Acid:

VVGSCVTDLVSLTTRLPKAG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

1.2

78.8

35.5

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

56.1

0.14

1.2

50.8

46.5

Minor 5ss

32.4

-2

2.5

38.4

39.2

Minor BPS

70.2

0.71

1.5

83.47

37.5

Associated Gene:

Gene:

RBKS

Ensembl Gene ID:

ENSAPLG00000013334

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013892

30958806 - 31024544

65739

ENSAPLT00000040142

30958806 - 31025071

66266

ENSAPLT00000033730

30958806 - 31026327

67522