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Intron Name: Anas_platyrhynchos_platyrhynchos_3_30976168_30981606_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30976168 - 30981606

Intron Length:

5439

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCACT

5'SS Class:

strong_major

3'SS Sequence:

ATCTTTTGTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGTTTAT

U12 Branch Point Sequence:

TTTTCTGTAGAT

Flanking Amino Acid:

LGAKTSLICKVGNDSFGNDY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

84.4

33.5

Major BPS

0.47

1.2

61.1

45.5

Major PPT

76.4

0.6

0.9

72.6

37.1

Minor 5ss

-0.9

2.9

58.6

45.7

Minor BPS

51.5

0.13

2.3

80.97

40.9

Associated Gene:

Gene:

RBKS

Ensembl Gene ID:

ENSAPLG00000013334

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019677

30962441 - 31027554

65114

ENSAPLT00000033730

30958806 - 31026327

67522

ENSAPLT00000013892

30958806 - 31024544

65739

ENSAPLT00000032970

30962441 - 31027554

65114

ENSAPLT00000042847

30962441 - 31025071

62631

ENSAPLT00000027888

30962441 - 31027554

65114

ENSAPLT00000040142

30958806 - 31025071

66266

ENSAPLT00000027017

30975656 - 31024447

48792

ENSAPLT00000040066

30972496 - 31027410

54915