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Intron Name: Anas_platyrhynchos_platyrhynchos_3_30984561_30991023_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30984561 - 30991023

Intron Length:

6463

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACATTAT

5'SS Class:

major

3'SS Sequence:

TATTTTGTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

AATTTTTTATTT

Flanking Amino Acid:

GTASIIVNSEGQNVIVIVPG

Intron Amino Acid Position:

105

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

77.5

33.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

82.6

0.73

0.8

81.5

35.9

Minor 5ss

40.1

-1.1

3.2

57.9

46.7

Minor BPS

60.9

0.42

1.5

74.66

36.6

Associated Gene:

Gene:

RBKS

Ensembl Gene ID:

ENSAPLG00000013334

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019677

30962441 - 31027554

65114

ENSAPLT00000040066

30972496 - 31027410

54915

ENSAPLT00000013892

30958806 - 31024544

65739

ENSAPLT00000033730

30958806 - 31026327

67522

ENSAPLT00000027888

30962441 - 31027554

65114

ENSAPLT00000042847

30962441 - 31025071

62631

ENSAPLT00000027017

30975656 - 31024447

48792

ENSAPLT00000040142

30958806 - 31025071

66266