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Intron Name: Anas_platyrhynchos_platyrhynchos_3_30996312_31005986_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30996312 - 31005986

Intron Length:

9675

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATGATG

5'SS Class:

strong_major

3'SS Sequence:

GGTTATTTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

ACATTATGATTT

Flanking Amino Acid:

SDVFCCNETEAEILTGIPVG

Intron Amino Acid Position:

191

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

75.3

40.4

Major BPS

84.6

0.86

41.2

Major PPT

0.65

69.4

45.7

Minor 5ss

35.9

-1.6

3.2

48.4

47.4

Minor BPS

43.4

-0.4

1.8

56.81

39.8

Associated Gene:

Gene:

RBKS

Ensembl Gene ID:

ENSAPLG00000013334

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027888

30962441 - 31027554

65114

ENSAPLT00000040142

30958806 - 31025071

66266

ENSAPLT00000027017

30975656 - 31024447

48792

ENSAPLT00000040066

30972496 - 31027410

54915

ENSAPLT00000013892

30958806 - 31024544

65739

ENSAPLT00000033730

30958806 - 31026327

67522

ENSAPLT00000032970

30962441 - 31027554

65114