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Intron Name: Anas_platyrhynchos_platyrhynchos_3_30999804_31005986_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

30999804 - 31005986

Intron Length:

6183

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTATC

5'SS Class:

strong_major

3'SS Sequence:

GGTTATTTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

ACATTATGATTT

Flanking Amino Acid:

DNHGISGPKHAEILTGIPVG

Intron Amino Acid Position:

226

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

87.3

Major BPS

84.6

0.86

41.2

Major PPT

0.65

69.4

45.7

Minor 5ss

42.7

-0.8

2.8

59.4

38.1

Minor BPS

43.4

-0.4

1.8

56.81

39.8

Associated Gene:

Gene:

RBKS

Ensembl Gene ID:

ENSAPLG00000013334

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042847

30962441 - 31025071

62631

ENSAPLT00000019677

30962441 - 31027554

65114