Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_31092402_31093491_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31092402 - 31093491

Intron Length:

1090

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGGGA

5'SS Class:

major

3'SS Sequence:

TTCTTCCCACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAT

U12 Branch Point Sequence:

TTCTTCCCACCA

Flanking Amino Acid:

ENQELVQIDRERRRNCTLTP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

66.4

39.3

Major BPS

72.5

0.56

1.2

39.9

Major PPT

77.6

0.62

0.8

71.2

34.5

Minor 5ss

27.9

-2.5

3.5

46.8

Minor BPS

46.2

-0.2

2.1

63.62

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013296

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013840

31077096 - 31125507

48412