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Intron Name: Anas_platyrhynchos_platyrhynchos_3_31173085_31173254_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

31173085 - 31173254

Intron Length:

170

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GCG|GCGGACCCT

5'SS Class:

weak_major

3'SS Sequence:

GCCGGTCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGGT

U12 Branch Point Sequence:

TTGTCCCGGTCC

Flanking Amino Acid:

GGRLPAPPARAPAPRYEEPP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.9

0.02

1.3

49.5

Major BPS

31.2

-1.1

4.2

53.3

44.2

Major PPT

61.6

0.26

0.9

53.5

36.7

Minor 5ss

23.2

-3.1

4.1

39.1

46.3

Minor BPS

38.2

-0.9

3.6

63.3

42.4

Associated Gene:

Gene:

SLC4A1AP

Ensembl Gene ID:

ENSAPLG00000013096

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013649

31165100 - 31173462

8363