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Intron Name: Anas_platyrhynchos_platyrhynchos_3_31436100_31437110_F

Intron Information:

Intron Rank:

133513

Intron Class:

major

Intron Phase:

Intron Coordinates:

31436100 - 31437110

Intron Length:

1011

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CCTTCTGTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

TGAGGTTCAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

33.2

Major BPS

77.3

0.68

81.5

Major PPT

81.4

0.71

0.8

75.8

32.6

Minor 5ss

36.4

-1.5

3.2

49.6

39.8

Minor BPS

43.3

-0.4

58.96

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021813

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042319

31413190 - 31440168

26979