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Intron Name: Anas_platyrhynchos_platyrhynchos_3_31546327_31547793_F

Intron Information:

Intron Rank:

135866

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

31546327 - 31547793

Intron Length:

1467

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAATC

5'SS Class:

strong_major

3'SS Sequence:

TTGTGCTAAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CATTCAA

U12 Branch Point Sequence:

TTGTGCTAAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.7

25.3

Major BPS

70.6

0.51

73.3

31.3

Major PPT

55.9

0.13

1.2

57.5

41.6

Minor 5ss

-1.3

3.1

51.9

44.9

Minor BPS

50.1

-0

2.2

68.21

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023170

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034651

31533843 - 31548809

14967

ENSAPLT00000017517

31546067 - 31548008

1942

ENSAPLT00000037749

31515357 - 31548809

33453