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Intron Name: Anas_platyrhynchos_platyrhynchos_3_31547890_31548587_F

Intron Information:

Intron Rank:

135871

Intron Class:

major

Intron Phase:

Intron Coordinates:

31547890 - 31548587

Intron Length:

698

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TCTAATTTGATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

83.1

30.9

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

86.1

0.81

0.6

85.4

21.9

Minor 5ss

30.6

-2.2

41.1

45.5

Minor BPS

55.9

0.27

1.5

72.21

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023170

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037749

31515357 - 31548809

33453

ENSAPLT00000034651

31533843 - 31548809

14967