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Intron Name: Anas_platyrhynchos_platyrhynchos_3_31759478_31798454_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31759478 - 31798454

Intron Length:

38977

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACGCA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTTT

U12 Branch Point Sequence:

TTTTTTTTTAAG

Flanking Amino Acid:

NCSDDEVLIYRMIPATNKAF

Intron Amino Acid Position:

458

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

68.4

36.8

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

88.4

0.86

0.9

94.6

18.5

Minor 5ss

-1.6

3.4

47.9

47.8

Minor BPS

56.3

0.05

1.8

67.7

39.9

Associated Gene:

Gene:

LRFN2

Ensembl Gene ID:

ENSAPLG00000012986

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043456

31646516 - 31799373

152858

ENSAPLT00000037710

31646516 - 31799373

152858

ENSAPLT00000013515

31578187 - 31799373

221187