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Intron Name: Anas_platyrhynchos_platyrhynchos_3_320387_331101_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

320387 - 331101

Intron Length:

10715

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

TGACTCTTATTC

Flanking Amino Acid:

IVIPFSFAWPRSYTLLVEAW

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

78.2

37.9

Major BPS

79.1

0.72

69.3

38.4

Major PPT

0.94

0.6

87.8

22.1

Minor 5ss

34.4

-1.8

2.8

43.3

43.8

Minor BPS

53.4

0.08

1.6

61.16

38.1

Associated Gene:

Gene:

JAG1

Ensembl Gene ID:

ENSAPLG00000009296

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009806

298130 - 331665

33536