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Intron Name: Anas_platyrhynchos_platyrhynchos_3_32205892_32206432_R


Intron Information:

Intron Rank:
19

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
32205892 - 32206432

Intron Length:
541

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTCTGTTTG

5'SS Class:
major

3'SS Sequence:
ACTTTTTGTACAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTCTGAC

U12 Branch Point Sequence:
TTTGCTCTACTT

Flanking Amino Acid:
RADRFLFEMSRIDHYQQRLQ

Intron Amino Acid Position:
783

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.7
0.56
1.3
71.4
41.2

Major BPS
81.4
0.78
0.9
71.3
36.7

Major PPT
80.8
0.69
0.9
76
37.4

Minor 5ss
45.3
-0.5
2.5
58.3
46.3

Minor BPS
49.8
0.07
2
75.83
41.7

Associated Gene:

Gene:
DAAM2

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

32186855 - 32378598
191744

32186855 - 32312867
126013