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Intron Name: Anas_platyrhynchos_platyrhynchos_3_32206540_32208061_R


Intron Information:

Intron Rank:
18

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
32206540 - 32208061

Intron Length:
1522

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGAGAACG

5'SS Class:
strong_major

3'SS Sequence:
TCTGCCACTCCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTCTCAC

U12 Branch Point Sequence:
GTCTCTGCCACT

Flanking Amino Acid:
EDLAKDMLEQLLKFVPEKSD

Intron Amino Acid Position:
748

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
86.4
0.86
0.8
74.2
36.1

Major BPS
72.7
0.56
1
75
30.1

Major PPT
73.2
0.52
0.9
63.1
38.3

Minor 5ss
28.3
-2.5
2.7
32
42.1

Minor BPS
42.6
-0.5
2.5
64.22
46.4

Associated Gene:

Gene:
DAAM2

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

32186855 - 32378598
191744

32186855 - 32312867
126013