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Intron Name: Anas_platyrhynchos_platyrhynchos_3_32230776_32231678_R


Intron Information:

Intron Rank:
13

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
32230776 - 32231678

Intron Length:
903

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TCG|GTAAGAGAC

5'SS Class:
strong_major

3'SS Sequence:
GTTTTTTTTCCAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTAAA

U12 Branch Point Sequence:
CTTTCTTTTTCT

Flanking Amino Acid:
DLVAQLNEFSHGGSISFPPP

Intron Amino Acid Position:
531

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.6
0.75
1
69.9
34.9

Major BPS
90.4
1
0.7
90.2
19.3

Major PPT
91.7
0.94
0.7
84.6
36

Minor 5ss
31.2
-2.1
3.4
42.5
44.6

Minor BPS
45.4
-0.2
3.6
79.44
43

Associated Gene:

Gene:
DAAM2

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

32186855 - 32378598
191744

32186855 - 32312867
126013