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Intron Name: Anas_platyrhynchos_platyrhynchos_3_32231864_32232280_R


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
32231864 - 32232280

Intron Length:
417

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAGTGTG

5'SS Class:
strong_major

3'SS Sequence:
CTGTTCTTCCTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATTTCAT

U12 Branch Point Sequence:
ATTTCATTAGCC

Flanking Amino Acid:
WRDQAEKFRKDHAELMSRLE

Intron Amino Acid Position:
469

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
96
1.08
0.7
85.2
32.2

Major BPS
91.2
1.02
0.7
91.7
20.2

Major PPT
76.1
0.59
0.8
69.3
36.9

Minor 5ss
36.3
-1.6
3.3
48.7
47.5

Minor BPS
65.1
0.45
1.8
78.53
36.4

Associated Gene:

Gene:
DAAM2

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

32186855 - 32378598
191744

32186855 - 32312867
126013