Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_32811333_32820355_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32811333 - 32820355

Intron Length:

9023

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCTTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTAAT

U12 Branch Point Sequence:

ACTAATTTCAGT

Flanking Amino Acid:

IFRLYLCIGWGVPMLFVILW

Intron Amino Acid Position:

270

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

38.1

Major BPS

74.4

0.61

0.9

73.6

28.6

Major PPT

79.8

0.67

0.7

32.6

Minor 5ss

39.1

-1.2

2.8

40.9

45.4

Minor BPS

42.9

-0.4

2.1

59.39

44.1

Associated Gene:

Gene:

GLP1R

Ensembl Gene ID:

ENSAPLG00000005054

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042511

32798400 - 32866242

67843

ENSAPLT00000031483

32798400 - 32858144

59745

ENSAPLT00000028199

32798400 - 32860806

62407

ENSAPLT00000005251

32798400 - 32883423

85024