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Intron Name: Anas_platyrhynchos_platyrhynchos_3_3285421_3285465_R

Intron Information:

Intron Rank:

Intron Class:

major_hybrid

Intron Phase:

Intron Coordinates:

3285421 - 3285465

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTGTA

5'SS Class:

major

3'SS Sequence:

GTTACGAAGAGAG|A

3'SS Class:

major_hybrid

U2 Branch Point Sequence:

TCCTTAT

U12 Branch Point Sequence:

TATCCCTTGATC

Flanking Amino Acid:

AKSKDKNQMEEHFSQLENQR

Intron Amino Acid Position:

972

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

75.2

35.1

Major BPS

78.8

0.72

67.9

40.1

Major PPT

42.8

-0.4

1.7

39.6

42.8

Minor 5ss

37.5

-1.4

3.3

45.6

43.6

Minor BPS

73.4

0.72

1.1

76.38

33.4

Associated Gene:

Gene:

PLCB1

Ensembl Gene ID:

ENSAPLG00000012885

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013477

3217190 - 3379623

162434