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Intron Name: Anas_platyrhynchos_platyrhynchos_3_3288079_3291885_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3288079 - 3291885

Intron Length:

3807

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTATGTTAA

5'SS Class:

major

3'SS Sequence:

TGTATCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTGTAT

U12 Branch Point Sequence:

GTGTGTGTATCT

Flanking Amino Acid:

EKTAKRDSKKKSETGSPDHS

Intron Amino Acid Position:

856

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

75.7

29.3

Major BPS

56.3

0.16

1.5

57.4

49.1

Major PPT

83.2

0.75

0.9

77.2

36.9

Minor 5ss

47.3

-0.3

2.5

57.4

41.7

Minor BPS

42.5

-0.4

2.5

63.74

46.9

Associated Gene:

Gene:

PLCB1

Ensembl Gene ID:

ENSAPLG00000012885

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013477

3217190 - 3379623

162434