Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_32907842_32908946_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32907842 - 32908946

Intron Length:

1105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAGGAAAA

5'SS Class:

major

3'SS Sequence:

AAACCTGTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAA

U12 Branch Point Sequence:

TGCTCATTATCA

Flanking Amino Acid:

IDSLARKLKLECRTISMGQG

Intron Amino Acid Position:

4107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.1

67.8

39.3

Major BPS

0.72

80.3

31.7

Major PPT

0.36

57.5

42.2

Minor 5ss

-2.2

3.1

31.2

42.7

Minor BPS

56.9

0.21

1.9

69.42

42.6

Associated Gene:

Gene:

DNAH8

Ensembl Gene ID:

ENSAPLG00000003458

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003597

32892646 - 33023858

131213

ENSAPLT00000020957

32907553 - 33023858

116306