Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_32923115_32924584_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32923115 - 32924584

Intron Length:

1470

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACACAT

5'SS Class:

major

3'SS Sequence:

GTTCTCTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTGTTTTAATA

Flanking Amino Acid:

GVNREVLPLKANLAKQEGRL

Intron Amino Acid Position:

3465

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

71.6

40.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.1

0.72

0.8

77.3

31.4

Minor 5ss

39.2

-1.2

3.2

56.5

47.6

Minor BPS

67.2

0.54

1.3

72.5

Associated Gene:

Gene:

DNAH8

Ensembl Gene ID:

ENSAPLG00000003458

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020957

32907553 - 33023858

116306

ENSAPLT00000003597

32892646 - 33023858

131213